Stem-loop ppy-mir-26a

Accession

MI0002643

Description

Pongo pygmaeus ppy-mir-26a precursor miRNA

Gene family

MIPF0000043; mir-26

Sequence

guggccucgUUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaugggccuauucuugguuacuugcacggggacgc
(((.((((((.(((((((((.((((((((((...............)))))))))).))))))))).)))))).)))

Structure

   g      U         C          gugcag 
gug ccucgU CAAGUAAUC AGGAUAGGCU      g
||| |||||| ||||||||| ||||||||||      u
cgc ggggca guucauugg ucuuauccgg      c
   a      c         u          guaacc 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr3: 108740900-108740976 [-]

Mature ppy-miR-26a

• Accession: MIMAT0002346
• Description: Pongo pygmaeus ppy-miR-26a mature miRNA
• Sequence: 10 - UUCAAGUAAUCCAGGAUAGGCU - 31
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24