Stem-loop sla-mir-28

Accession

MI0002654

Description

Saguinus labiatus sla-mir-28 precursor miRNA

Gene family

MIPF0000057; mir-28

Sequence

gguccuugcccucAAGGAGCUCACAGUCUAUUGAGuugccuuucuaacuuucccacuagauuguaagcuccuggagggcaggcacu
(((.(((((((((.(((((((.((((((((.(((((((......)))))....)).)))))))).))))))).))))))))).)))

Structure

   c         A       C        U  ----     cc 
ggu cuugcccuc AGGAGCU ACAGUCUA UG    AGuug  u
||| ||||||||| ||||||| |||||||| ||    |||||   
uca ggacgggag uccucga uguuagau ac    ucaau  u
   c         g       a        c  ccuu     cu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-28

• Accession: MIMAT0002357
• Description: Saguinus labiatus sla-miR-28 mature miRNA
• Sequence: 14 - AAGGAGCUCACAGUCUAUUGAG - 35
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24