miRBase entry: sla-mir-29b

Stem-loop sla-mir-29b


Accession
MI0002735
Description
Saguinus labiatus sla-mir-29b precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

cuucuggaagcugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUguuuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure
         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauuuu UGACUAAAGU UACCAC GA Ucua      u
         g          U      -  -    uguuuc 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-29b

Accession MIMAT0002440
Description Saguinus labiatus sla-miR-29b mature miRNA
Sequence 52 - UAGCACCAUUUGAAAUCAGU - 71
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24