Stem-loop lla-mir-105

Accession

MI0002752

Description

Lagothrix lagotricha lla-mir-105 precursor miRNA

Gene family

MIPF0000074; mir-105

Sequence

ugugcaucguggUCAAAUGCUCAGACUCCUGUgguggcugcucaugcaccacggauguuugagcaugugcuacggugucua
...(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).)))))))))))...

Structure

ugu         U  A          UC        gcug 
   gcaucgugg CA AUGCUCAGAC  CUGUggug    c
   ||||||||| || ||||||||||  ||||||||     
   uguggcauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guac 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-105

• Accession: MIMAT0002456
• Description: Lagothrix lagotricha lla-miR-105 mature miRNA
• Sequence: 13 - UCAAAUGCUCAGACUCCUGU - 32
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24