Stem-loop ppa-mir-124a

Accession

MI0002763

Description

Pan paniscus ppa-mir-124a precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

aucaagauuagaggcucugcucuccguguucacagcggaccuugauuuaaugucauacaaUUAAGGCACGCGGUGAAUGCCAagagcggagccuacggcugcacuugaa
.(((((..(((((((((((((((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))))))))....)))..))))).

Structure

a     au   ----            cc        a   ga        uaau 
 ucaag  uag    aggcucugcucu  guguucac gcg  ccuugauu    g
 |||||  |||    ||||||||||||  |||||||| |||  ||||||||    u
 aguuc  guc    uccgaggcgaga  CGUAAGUG CGC  GGAAUUaa    c
a     ac   ggca            AC        G   AC        caua 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr8: 62587931-62588039 [+]

Mature ppa-miR-124a

• Accession: MIMAT0002467
• Description: Pan paniscus ppa-miR-124a mature miRNA
• Sequence: 61 - UUAAGGCACGCGGUGAAUGCCA - 82
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24