Stem-loop ppa-mir-10a

Accession

MI0002792

Description

Pan paniscus ppa-mir-10a precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

gaucugucugucuucuguauaUACCCUGUAGAUCCGAAUUUGUGuaaggaauuuuguggucacaaauucguaucuaggggaauauguaguugacauaaacacuccgcucu
....(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...))).........

Structure

-----gauc   --c    uu        A    G     C          uaaggaa 
         ugu   uguc  cuguauaU CCCU UAGAU CGAAUUUGUG       u
         |||   ||||  |||||||| |||| ||||| ||||||||||        
         aca   acag  gauguaua gggg aucua gcuuaaacac       u
ucucgccuc   aau    uu        a    -     u          ugguguu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr17: 9141720-9141829 [+]

Mature ppa-miR-10a

• Accession: MIMAT0002490
• Description: Pan paniscus ppa-miR-10a mature miRNA
• Sequence: 22 - UACCCUGUAGAUCCGAAUUUGUG - 44
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24