Stem-loop sla-mir-181a-2

Accession

MI0002809

Description

Saguinus labiatus sla-mir-181a-2 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

agaagggcuaccaggccaaccuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggacuugaaaaaaaaccacugaccguugacuguaccuugggguccuua
.((((((((....)))...))))).(((((((((((((.(((.((((((..(((((((.((((.............))))))))))))))))).))).))))))))))))).

Structure

agaagggcuaccaggccaaccuuca             A   U      CU       A    gggac 
                         gaggacuccaagg ACA UCAACG  GUCGGUG GUuu     u
                         ||||||||||||| ||| ||||||  ||||||| ||||     u
                         uuccugggguucc ugu aguugc  cagucac caaa     g
------------------------a             a   c      --       -    aaaaa 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-181a

• Accession: MIMAT0002507
• Description: Saguinus labiatus sla-miR-181a mature miRNA
• Sequence: 39 - AACAUUCAACGCUGUCGGUGAGU - 61
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24