Stem-loop age-mir-222

Accession

MI0002896

Description

Ateles geoffroyi age-mir-222 precursor miRNA

Gene family

MIPF0000051; mir-221

Sequence

ucugccggaagguguggguacccucaguggcucaguagccaguguagauccugucuuuuguaaucaguAGCUACAUCUGGCUACUGGGUCUCugauggcaucuuuuagcu
...((.(((((((((.(......((((.(((((((((((((((((((...(((...........)))...))))).)))))))))))))).))))).))))))))).)).

Structure

ucu  c         g guaccc    u              -     auc   ucuu 
   gc ggaaggugu g      ucag ggcucaguagccag uguag   cug    u
   || ||||||||| |      |||| |||||||||||||| |||||   |||    u
   cg uuuucuacg u      aguC CUGGGUCAUCGGUC ACAUC   gac    g
--u  a         g ------    U              U     GAu   uaau 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature age-miR-222

• Accession: MIMAT0002587
• Description: Ateles geoffroyi age-miR-222 mature miRNA
• Sequence: 69 - AGCUACAUCUGGCUACUGGGUCUC - 92
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24