miRBase entry: sla-mir-223

Stem-loop sla-mir-223


Accession
MI0002901
Description
Saguinus labiatus sla-mir-223 precursor miRNA
Gene family
MIPF0000067; mir-223


Sequence

ccuggccuccugcagugccacgcuccguguauuugacaagcugaguuggacacuccgugugguagagUGUCAGUUUGUCAAAUACCCCaagugcgacacaugcuuagcag
....((.....((((((.(.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).).))).)))...))..

Structure
ccug  cuccu   -   c a    cc u              gaguug       cgu 
    gc     gca gug c cgcu  g guauuugacaagcu      gacacuc   g
    ||     ||| ||| | ||||  | ||||||||||||||      |||||||   u
    cg     cgu cac g guga  C CAUAAACUGUUUGA      CUGUgag   g
--ga  --auu   a   a c    aC C              ------       aug 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-223

Accession MIMAT0002592
Description Saguinus labiatus sla-miR-223 mature miRNA
Sequence 68 - UGUCAGUUUGUCAAAUACCCC - 88
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24