Stem-loop lla-mir-198

Accession

MI0002921

Description

Lagothrix lagotricha lla-mir-198 precursor miRNA

Gene family

MIPF0000090; mir-198

Sequence

ucacuGGUCCAGAAGGGAGCUAGGuacuugugauuuuuccuucuuuucuguagaauaaauga
.........(((((((((...(((..............))))))))))))............

Structure

---ucacuGGUC         GCU   uacuug 
            CAGAAGGGA   AGG      u
            |||||||||   |||       
            gucuuuucu   ucc      g
aguaaauaagau         ---   uuuuua 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-198

• Accession: MIMAT0002612
• Description: Lagothrix lagotricha lla-miR-198 mature miRNA
• Sequence: 6 - GGUCCAGAAGGGAGCUAGG - 24
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24