Stem-loop lla-mir-181a-1

Accession

MI0002939

Description

Lagothrix lagotricha lla-mir-181a-1 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

ugaguuuugagguugcuucagugAACAUUCAACGCUGUCGGUGAGUuuggaauuaaaaucaaaACCAUCGACCGUUGAUUGUACCcuauggcuaaccaucaucuacucca
.((((..((((((((((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..))).)))).)))...))))..

Structure

-u    -uu   -    -   uc  u A   U      CU       A    g  au 
  gagu   uga gguu gcu  ag g ACA UCAACG  GUCGGUG GUuu ga  u
  ||||   ||| |||| |||  || | ||| ||||||  ||||||| |||| ||  a
  cuca   acu ccaa cgg  uc C UGU AGUUGC  CAGCUAC CAaa cu  a
ac    ucu   a    u   ua  C A   U      --       -    a  aa 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-181a-5p

• Accession: MIMAT0002631
• Description: Lagothrix lagotricha lla-miR-181a-5p mature miRNA
• Sequence: 24 - AACAUUCAACGCUGUCGGUGAGU - 46
• Evidence: not_experimental

Mature lla-miR-181a-3p

• Accession: MIMAT0002632
• Description: Lagothrix lagotricha lla-miR-181a-3p mature miRNA
• Sequence: 64 - ACCAUCGACCGUUGAUUGUACC - 85
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24