miRBase entry: lla-mir-181b

Stem-loop lla-mir-181b


Accession
MI0002940
Description
Lagothrix lagotricha lla-mir-181b precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

ccugugcagagauuauuuuuuaaaaggucacaaucAACAUUCAUUGCUGUCGGUGGGUUgaacuguguggacaagcucacugaacaaugaaugcaacuguggccccgcuu
.........................(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....)))))))......

Structure
ccugugcagagauuauuuuuuaaaa       aucAA         CUG          gaac   g 
                         ggucaca     CAUUCAUUG   UCGGUGGGUU    ugu u
                         |||||||     |||||||||   ||||||||||    |||  
                         ccggugu     guaaguaac   agucacucga    aca g
-------------------uucgcc       -caac         --a          ----   g 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-181b

Accession MIMAT0002633
Description Lagothrix lagotricha lla-miR-181b mature miRNA
Sequence 36 - AACAUUCAUUGCUGUCGGUGGGUU - 59
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24