Stem-loop lca-mir-19b-1

Accession

MI0002975

Description

Lemur catta lca-mir-19b-1 precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

cacuguucuaugguuaguuuugcagguuugcauccagcuguguaauauucugcUGUGCAAAUCCAUGCAAAACUGAcugugguagug
(((((..(((((((((((((((((((((((((..((((.............)))))))))).)).))))))))))))))))))))))

Structure

     uu                 -  -      uc    ugugu 
cacug  cuaugguuaguuuugca gg uuugca  cagc     a
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lca-miR-19b

• Accession: MIMAT0002670
• Description: Lemur catta lca-miR-19b mature miRNA
• Sequence: 54 - UGUGCAAAUCCAUGCAAAACUGA - 76
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24