miRBase entry: lca-mir-27a

Stem-loop lca-mir-27a


Accession
MI0003044
Description
Lemur catta lca-mir-27a precursor miRNA
Gene family
MIPF0000036; mir-27


Sequence

cugaggagcagggcuuagcugcuugugagcaggguccacaccaaaucaugUUCACAGUGGCUAAGUUCCGCCccccgg
(((.((.((.(((((((((((((.(((((((.(((.........))).)))))))))))))))))))).)).)).)))

Structure
   a  a  a             u       g   cca 
cug gg gc gggcuuagcugcu gugagca ggu   c
||| || || ||||||||||||| ||||||| |||   a
ggc cc CG CUUGAAUCGGUGA CACUUgu cua   c
   c  C  C             -       a   aac 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lca-miR-27a

Accession MIMAT0002746
Description Lemur catta lca-miR-27a mature miRNA
Sequence 51 - UUCACAGUGGCUAAGUUCCGCC - 72
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24