miRBase entry: age-mir-106b

Stem-loop age-mir-106b


Accession
MI0003062
Description
Ateles geoffroyi age-mir-106b precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

ccugccggggcUAAAGUGCUGACAGUGCAGAUagugguccucuccgugcuaccgcacuguggguacuugcugcuccagcagg
(((((.(((((..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))...))))).)))))

Structure
     c     -UA       G       A A    --  uc 
ccugc ggggc   AAGUGCU ACAGUGC G Uagu  gg  c
||||| |||||   ||||||| ||||||| | ||||  ||   
ggacg ccucg   uucaugg ugucacg c aucg  cc  u
     a     ucg       g       c -    ug  uc 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature age-miR-106b

Accession MIMAT0002761
Description Ateles geoffroyi age-miR-106b mature miRNA
Sequence 12 - UAAAGUGCUGACAGUGCAGAU - 32
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24