miRBase entry: sla-mir-93

Stem-loop sla-mir-93


Accession
MI0003077
Description
Saguinus labiatus sla-mir-93 precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

cugggggcuccAAAGUGCUGUUCGUGCAGGUAGugugauuacccaaccuacugcugagcuagcacuucccgagcccccgg
((((((((((..((((((((((((.((((.(((.((.........)))))))))))))).)))))))...))))))))))

Structure
          -cA       -     U    G   u  gau 
cugggggcuc   AAGUGCU GUUCG GCAG UAG gu   u
||||||||||   ||||||| ||||| |||| ||| ||   a
ggcccccgag   uucacga cgagu cguc auc ca   c
          ccc       u     -    -   -  acc 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-93

Accession MIMAT0002776
Description Saguinus labiatus sla-miR-93 mature miRNA
Sequence 12 - AAAGUGCUGUUCGUGCAGGUAG - 33
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24