miRBase entry: sla-mir-183

Stem-loop sla-mir-183


Accession
MI0003090
Description
Saguinus labiatus sla-mir-183 precursor miRNA
Gene family
MIPF0000066; mir-183


Sequence

ccgcagaacgugacuccuguucugugUAUGGCACUGGUAGAAUUCACUGugaacagucucggucagugaauuaccgaagggccauaaacagagcagagacagauccucga
.((.((.(..((.(((.((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))))).))..).)))).

Structure
c  c  a cg  a   c        g      A  --    GA        --   ac 
 cg ag a  ug cuc uguucugu UAUGGC CU  GGUA  AUUCACUG  uga  a
 || || |  || ||| |||||||| |||||| ||  ||||  ||||||||  |||   
 gc uc u  ac gag acgagaca auaccg ga  ccau  uaagugac  gcu  g
a  -  c ag  a   -        a      g  ag    --        ug   cu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-183

Accession MIMAT0002789
Description Saguinus labiatus sla-miR-183 mature miRNA
Sequence 27 - UAUGGCACUGGUAGAAUUCACUG - 49
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24