Stem-loop ggo-mir-19b-2

Accession

MI0003097

Description

Gorilla gorilla ggo-mir-19b-2 precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

acauugcuacuuacaauuaguuuugcagguuugcauuucagcguauauauguauauguggcUGUGCAAAUCCAUGCAAAACUGAuugugauaaugu
((((((....((((((((((((((((((((((((((....(((((((....)))))))....))))))).)).)))))))))))))))))))))))

Structure

      cuac                 -  -       uuca       u 
acauug    uuacaauuaguuuugca gg uuugcau    gcguaua a
||||||    ||||||||||||||||| || |||||||    |||||||  
uguaau    aguguuAGUCAAAACGU CC AAACGUG    uguauau u
      ----                 A  U       Ucgg       g 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chrX: 134207621-134207716 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ggo-mir-19b-2

Mature ggo-miR-19b

• Accession: MIMAT0002663
• Description: Gorilla gorilla ggo-miR-19b mature miRNA
• Sequence: 62 - UGUGCAAAUCCAUGCAAAACUGA - 84
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24