miRBase entry: hsa-mir-520f

Stem-loop hsa-mir-520f


Accession
MI0003146
Symbol
HGNC: MIR520F
Description
Homo sapiens hsa-mir-520f precursor miRNA
Gene family
MIPF0000020; mir-515

Literature search
36 open access papers mention hsa-mir-520f
(189 sentences)

Sequence

252 reads, 22 reads per million, 8 experiments
ucucaggcugugacCCUCUAAAGGGAAGCGCUUUCUguggucagaaagaaaagcAAGUGCUUCCUUUUAGAGGGUUaccguuuggga
((((((((.((((((((((((((((((((((((((((....)))).........)))))))))))))))))))))))).))))))))

Structure
        u                        ---------    u 
ucucaggc gugacCCUCUAAAGGGAAGCGCUU         UCUg g
|||||||| ||||||||||||||||||||||||         ||||  
aggguuug caUUGGGAGAUUUUCCUUCGUGAA         agac g
        c                        cgaaaagaa    u 


Annotation confidence Not enough data
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Genome context
chr19: 53682159-53682245 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from hsa-mir-520f
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-520f is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-520f-3p

Accession MIMAT0002830
Description Homo sapiens hsa-miR-520f-3p mature miRNA
Sequence 55 - AAGUGCUUCCUUUUAGAGGGUU - 76
Evidence experimental
array-cloned [1], Illumina [2]
Database links
Predicted targets

Mature hsa-miR-520f-5p

Accession MIMAT0026609
Description Homo sapiens hsa-miR-520f-5p mature miRNA
Sequence 15 - CCUCUAAAGGGAAGCGCUUUCU - 36
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45