Stem-loop hsa-mir-518d

Accession

MI0003171

Symbol

HGNC: MIR518D

Description

Homo sapiens hsa-mir-518d precursor miRNA

Gene family

MIPF0000020; mir-515

Literature search

11 open access papers mention hsa-mir-518d
(15 sentences)

Sequence

12 reads, 15 reads per million, 6 experiments

ucccaugcugugaccCUCUAGAGGGAAGCACUUUCUGuugucugaaagaaacCAAAGCGCUUCCCUUUGGAGCguuacgguuugaga
((.((.((((((((.((((((((((((((.((((..(((.(((...)))))).)))).)))))))))))))).)))))))).)).))

Structure

  c  u        c              A    CU   g   g 
uc ca gcugugac CUCUAGAGGGAAGC CUUU  Guu ucu  
|| || |||||||| |||||||||||||| ||||  ||| ||| a
ag gu uggcauug GAGGUUUCCCUUCG GAAA  caa aga  
  a  u        C              C    -C   -   a 

Annotation confidence Not enough data

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context

chr19: 53734877-53734963 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from hsa-mir-518d

Disease association

hsa-mir-518d is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-518d-5p

• Accession: MIMAT0005456
• Description: Homo sapiens hsa-miR-518d-5p mature miRNA
• Sequence: 16 - CUCUAGAGGGAAGCACUUUCUG - 37
• Evidence: experimental ; array-cloned [1], cloned [2]

Mature hsa-miR-518d-3p

• Accession: MIMAT0002864
• Description: Homo sapiens hsa-miR-518d-3p mature miRNA
• Sequence: 53 - CAAAGCGCUUCCCUUUGGAGC - 73
• Evidence: experimental ; array-cloned [1]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 15965474
   Identification of hundreds of conserved and nonconserved human microRNAs
   "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
   "Nat Genet (2005) 37:766-770