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miRBase |
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Stem-loop sequence dre-mir-489 |
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Accession | MI0003256 (change log) | ||||||
Description | Danio rerio miR-489 stem-loop | ||||||
Gene family | MIPF0000111; mir-489 | ||||||
Stem-loop |
acugacu --g ---c ug c --- u 5' ugagu guggc ugg gucguauguauga gucauuu acu c ||||| ||||| ||| ||||||||||||| ||||||| ||| 3' acucg caucg auc cggcauguauacu cagugag uga a ----acu gua ucaa gu a guu a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
miR-489 was predicted in zebrafish based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication), and later verified experimentally [1]. |
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Genome context |
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Database links |
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Mature sequence dre-miR-489 |
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Accession | MIMAT0002940 |
Sequence |
60 - agugacaucauauguacggcugc - 82 |
Deep sequencing | 274 reads, 10 experiments |
Evidence | experimental; cloned [1], Northern [1] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:16698962
"Cloning and expression of new microRNAs from zebrafish"
Nucleic Acids Res. 34:2558-2569(2006).
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