Stem-loop dre-let-7j

Accession

MI0003343

Description

Danio rerio dre-let-7j precursor miRNA

Literature search

39 open access papers mention dre-let-7j
(202 sentences)

Sequence

6328 reads, 480 reads per million, 11 experiments

gguUGAGGUAGUUGUUUGUACAGUUuuuagggucuguuauucugcccuguuaaggagcuaacuguacagacuacugccuugcc
(((.((((((((.((((((((((((..((((((..(.....).))))))..........)))))))))))).)))))))))))

Structure

   U        U            --------uu      cu u 
ggu GAGGUAGU GUUUGUACAGUU          uagggu  g u
||| |||||||| ||||||||||||          ||||||  | a
ccg uuccguca cagacaugucaa          gucccg  c u
   -        u            ucgaggaauu      -u u 

Annotation confidence High

Comments

This zebrafish miRNA sequence is predicted based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication).

Genome context

chr6: 41454791-41454873 [+]

Mature dre-let-7j

• Accession: MIMAT0003015
• Description: Danio rerio dre-let-7j mature miRNA
• Sequence: 4 - UGAGGUAGUUGUUUGUACAGUU - 25
• Evidence: not_experimental

References