miRBase entry: dre-mir-135b

Stem-loop dre-mir-135b


Accession
MI0003364
Description
Danio rerio dre-mir-135b precursor miRNA
Gene family
MIPF0000028; mir-135

Literature search
6 open access papers mention dre-mir-135b
(16 sentences)

Sequence

1353 reads, 121 reads per million, 8 experiments
cucuuugccccgUAUGGCUUUUUAUUCCUAUCUGagaauugcucaggacucAUAUAGGGAUGGAAGCCAUGCAgggcugggg
((((..((((.(((((((((((.(((((((((((((.....))))).......))))))))))))))))))).)))).))))

Structure
    uu    c           U        -------     a 
cucu  gccc gUAUGGCUUUU AUUCCUAU       CUGag a
||||  |||| ||||||||||| ||||||||       ||||| u
gggg  cggg CGUACCGAAGG UAGGGAUA       gacuc u
    -u    A           -        UAcucag     g 


Annotation confidence High
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Comments
This zebrafish miRNA sequence is predicted based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication).

Genome context
chr8: 26005588-26005669 [+]

Database links

Mature dre-miR-135b-5p

Accession MIMAT0003032
Description Danio rerio dre-miR-135b-5p mature miRNA
Sequence 13 - UAUGGCUUUUUAUUCCUAUCUG - 34
Evidence not_experimental
Database links
Predicted targets

Mature dre-miR-135b-3p

Accession MIMAT0032006
Description Danio rerio dre-miR-135b-3p mature miRNA
Sequence 52 - AUAUAGGGAUGGAAGCCAUGCA - 73
Evidence not_experimental
Database links

References