Stem-loop hsa-mir-554

Accession

MI0003559

Symbol

HGNC: MIR554

Description

Homo sapiens hsa-mir-554 precursor miRNA

Gene family

MIPF0000551; mir-554

Literature search

2 open access papers mention hsa-mir-554
(5 sentences)

Sequence

5 reads, 3 reads per million, 4 experiments

accugaguaaccuuuGCUAGUCCUGACUCAGCCAGUacuggucuuagacuggugaugggucaggguucauauuuuggcaucucucucugggcaucu
.((.(((.......((((((((((((((((((((((.(((....)))))))))..))))))))))........)))))).....))).))......

Structure

-----a  u   uaaccuu      --------          --      a   g 
      cc gag       uGCUAG        UCCUGACUCA  GCCAGU cug u
      || |||       ||||||        ||||||||||  |||||| |||  
      gg cuc       acgguu        gggacugggu  ugguca gau c
ucuacg  u   --ucucu      uuauacuu          ag      -   u 

Annotation confidence Not enough data

Genome context

chr1: 151545796-151545891 [+]

Mature hsa-miR-554

• Accession: MIMAT0003217
• Description: Homo sapiens hsa-miR-554 mature miRNA
• Sequence: 16 - GCUAGUCCUGACUCAGCCAGU - 36
• Evidence: experimental ; SAGE [1]

References

1. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692