miRBase entry: hsa-mir-564

Stem-loop hsa-mir-564


Accession
MI0003570
Symbol
HGNC: MIR564
Description
Homo sapiens hsa-mir-564 precursor miRNA
Gene family
MIPF0000612; mir-564

Literature search
10 open access papers mention hsa-mir-564
(85 sentences)

Sequence

14 reads, 7 reads per million, 8 experiments
cgggcagcgggugccAGGCACGGUGUCAGCAGGCaacauggccgagaggccggggccuccgggcggcgccguguccgcgaccgcguacccugac
.(((..((((..((..(((((((((((.((((((....(((((....)))))..))))....))))))))))))).))..))))...)))....

Structure
---c   -ca    gu  cA           A  ----    aaca     g 
    ggg   gcgg  gc  GGCACGGUGUC GC    AGGC    uggcc a
    |||   ||||  ||  ||||||||||| ||    ||||    |||||  
    ccc   cgcc  cg  cugugccgcgg cg    uccg    gccgg g
cagu   aug    ag  -c           -  ggcc    --gg     a 


Annotation confidence Not enough data
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Genome context
chr3: 44861888-44861981 [+]

Disease association
hsa-mir-564 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-564

Accession MIMAT0003228
Description Homo sapiens hsa-miR-564 mature miRNA
Sequence 16 - AGGCACGGUGUCAGCAGGC - 34
Evidence experimental
RT-PCR [1], SAGE [1]

References

  1. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692