Stem-loop hsa-mir-580

Accession

MI0003587

Symbol

HGNC: MIR580

Description

Homo sapiens hsa-mir-580 precursor miRNA

Gene family

MIPF0000515; mir-580

Literature search

9 open access papers mention hsa-mir-580
(44 sentences)

Sequence

119 reads, 14 reads per million, 41 experiments

auaaaauuuccaauuggaaccUAAUGAUUCAUCAGACUCAGAUauuuaaguuaacaguauUUGAGAAUGAUGAAUCAUUAGGuuccggucagaaauu
....((((((..((((((((((((((((((((((..((((((((((.........))))))))))..))))))))))))))))))))))..))))))

Structure

auaa      ca                      GA          uaa 
    aauuuc  auuggaaccUAAUGAUUCAUCA  CUCAGAUauu   g
    ||||||  ||||||||||||||||||||||  ||||||||||   u
    uuaaag  uggccuuGGAUUACUAAGUAGU  GAGUUuauga   u
----      ac                      AA          caa 

Annotation confidence Not enough data

Genome context

chr5: 36147892-36147988 [-]

Disease association

hsa-mir-580 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-580-3p

• Accession: MIMAT0003245
• Description: Homo sapiens hsa-miR-580-3p mature miRNA
• Sequence: 61 - UUGAGAAUGAUGAAUCAUUAGG - 82
• Evidence: experimental ; RT-PCR [1], SAGE [1], Illumina [2]

Mature hsa-miR-580-5p

• Accession: MIMAT0026617
• Description: Homo sapiens hsa-miR-580-5p mature miRNA
• Sequence: 22 - UAAUGAUUCAUCAGACUCAGAU - 43
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45