Stem-loop sequence hsa-mir-588

Accession

MI0003597 (change log)

Symbol

HGNC:MIR588

Description

Homo sapiens miR-588 stem-loop

Gene family

MIPF0000681; mir-588

Literature search

5 open access papers mention hsa-mir-588
(54 sentences)

Stem-loop

   ag       a       -     caa     u       uau 
5'   cuuaggu ccaauuu ggcca   ugggu agaacac   u
     ||||||| ||||||| |||||   ||||| |||||||   c
3'   gaauccg gguuaaa ccggu   accca ucuugug   c
   --       -       a     acc     u       uua 

Deep sequencing

139 reads, 4.44 reads per million, 45 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr6: 126484631-126484713 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR588
• HGNC:MIR588
• miRBase Tracker:MI0003597

Mature sequence hsa-miR-588

• Accession: MIMAT0003255
• Sequence: 16 - uuggccacaauggguuagaac - 36
• Deep sequencing: 86 reads, 29 experiments
• Evidence: experimental; SAGE [1]
• Predicted targets:
  • TargetMiner:hsa-miR-588
  • TargetScanVert:hsa-miR-588
  • miRDB:hsa-miR-588
  • microrna.org:hsa-miR-588

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).