miRBase entry: hsa-mir-593

Stem-loop hsa-mir-593


Accession
MI0003605
Symbol
HGNC: MIR593
Description
Homo sapiens hsa-mir-593 precursor miRNA
Gene family
MIPF0000503; mir-593

Literature search
12 open access papers mention hsa-mir-593
(63 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments
cccccagaaucugucAGGCACCAGCCAGGCAUUGCUCAGCccguuucccucugggggagcaaggaguggugcuggguuUGUCUCUGCUGGGGUUUCUccu
.((((((.......((((.((.((((.((((((((((.....(((((((....)))))))...)))))))))).)))).)).))))))))))........

Structure
-------c      aaucugu    C  C    A          AGCcc       u 
        ccccag       cAGG AC AGCC GGCAUUGCUC     guuuccc c
        ||||||       |||| || |||| ||||||||||     |||||||  
        GGGGUC       GUCU UG uugg ucguggugag     cgagggg u
uccUCUUU      -------    C  U    g          --gaa       g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 128081861-128081960 [+]

Disease association
hsa-mir-593 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-593-5p

Accession MIMAT0003261
Description Homo sapiens hsa-miR-593-5p mature miRNA
Sequence 16 - AGGCACCAGCCAGGCAUUGCUCAGC - 40
Evidence experimental
SAGE [1]

Mature hsa-miR-593-3p

Accession MIMAT0004802
Description Homo sapiens hsa-miR-593-3p mature miRNA
Sequence 79 - UGUCUCUGCUGGGGUUUCU - 97
Evidence experimental
cloned [2]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692