Stem-loop hsa-mir-625

Accession

MI0003639

Symbol

HGNC: MIR625

Description

Homo sapiens hsa-mir-625 precursor miRNA

Literature search

40 open access papers mention hsa-mir-625
(457 sentences)

Sequence

13163 reads, 196 reads per million, 124 experiments

aggguagagggaugAGGGGGAAAGUUCUAUAGUCCuguaauuagaucucagGACUAUAGAACUUUCCCCCUCAucccucugcccu
(((((((((((((((((((((((((((((((((((((...........)))))))))))))))))))))))))))))))))))))

Structure

                                     uaau 
aggguagagggaugAGGGGGAAAGUUCUAUAGUCCug    u
|||||||||||||||||||||||||||||||||||||    a
ucccgucucccuACUCCCCCUUUCAAGAUAUCAGgac    g
                                     ucua 

Annotation confidence High

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context

chr14: 65471102-65471186 [+]

Disease association

hsa-mir-625 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-625-5p

• Accession: MIMAT0003294
• Description: Homo sapiens hsa-miR-625-5p mature miRNA
• Sequence: 15 - AGGGGGAAAGUUCUAUAGUCC - 35
• Evidence: experimental ; Microarray [1], RT-PCR [1], SAGE [1], cloned [2]

Mature hsa-miR-625-3p

• Accession: MIMAT0004808
• Description: Homo sapiens hsa-miR-625-3p mature miRNA
• Sequence: 52 - GACUAUAGAACUUUCCCCCUCA - 73
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692