miRBase entry: dre-mir-135a

Stem-loop dre-mir-135a


Accession
MI0003692
Description
Danio rerio dre-mir-135a precursor miRNA
Gene family
MIPF0000028; mir-135

Literature search
3 open access papers mention dre-mir-135a
(4 sentences)

Sequence

24 reads, 14 reads per million, 5 experiments
acagcugucgugucuUAUGGCUUUUUAUUCCUAUGUGAaggugaacaaggcucauguagggauacaagccacuaaacacgcagucagaaaucagcuuu
...((((.(((((.(((((((((..(((((((((((((.(.(......).)))))))))))))).)))))).))))))))))))..............

Structure
-----------aca    u     c   -      UU             a g ga 
              gcug cgugu uUA UGGCUU  UAUUCCUAUGUGA g u  a
              |||| ||||| ||| ||||||  ||||||||||||| | |   
              ugac gcaca aau accgaa  auagggauguacu c g  c
uuucgacuaaagac    -     -   c      -c             - g aa 


Annotation confidence Not enough data
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Genome context
chr25: 31044110-31044207 [-]

Database links

Mature dre-miR-135a

Accession MIMAT0003348
Description Danio rerio dre-miR-135a mature miRNA
Sequence 16 - UAUGGCUUUUUAUUCCUAUGUGA - 38
Evidence experimental
array [1]
Database links
Predicted targets

References

  1. PubMed ID: 15919954
    MicroRNA expression in zebrafish embryonic development
    "Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH"
    "Science (2005) 309:310-311