miRBase entry: dre-mir-139

Stem-loop dre-mir-139


Accession
MI0003693
Description
Danio rerio dre-mir-139 precursor miRNA
Gene family
MIPF0000117; mir-139


Sequence

1793 reads, 164 reads per million, 10 experiments
cuguauUCUACAGUGCAUGUGUCUccaguguuucuauggcgacUGGGGAGGCAGCGCUGUUGGAAUaac
...(((((((((((((.(((.(((((((((((.....))).)))))))).))))))))).)))))))..

Structure
cug       -      A   G        -   u 
   uauUCUA CAGUGC UGU UCUccagu guu c
   ||||||| |||||| ||| |||||||| ||| u
   aUAAGGU GUCGCG ACG AGGGGUca cgg a
-ca       U      -   G        g   u 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature dre-miR-139-5p

Accession MIMAT0003349
Description Danio rerio dre-miR-139-5p mature miRNA
Sequence 7 - UCUACAGUGCAUGUGUCU - 24
Evidence experimental
in-situ [1]
Database links
Predicted targets

Mature dre-miR-139-3p

Accession MIMAT0032008
Description Danio rerio dre-miR-139-3p mature miRNA
Sequence 44 - UGGGGAGGCAGCGCUGUUGGAAU - 66
Evidence not_experimental
Database links

References

  1. PubMed ID: 15919954
    MicroRNA expression in zebrafish embryonic development
    "Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH"
    "Science (2005) 309:310-311