miRBase entry: hsa-mir-2113

Stem-loop hsa-mir-2113


Accession
MI0003939
Symbol
HGNC: MIR2113
Description
Homo sapiens hsa-mir-2113 precursor miRNA

Literature search
3 open access papers mention hsa-mir-2113
(4 sentences)

Sequence

31 reads, 2 reads per million, 3 experiments
uuuucaaagcaaugugugacagguacagggacaaaucccguuaauaaguaagaggAUUUGUGCUUGGCUCUGUCACaugccacuuugaaaa
.((((((((...(((((((((((..((((.((((((((..(((.....)))..)))))))).))))..)))))))))))...)))))))).

Structure
u        caa           ua    g        cg   a 
 uuucaaag   ugugugacagg  cagg acaaaucc  uua u
 ||||||||   |||||||||||  |||| ||||||||  ||| a
 aaaguuuc   guaCACUGUCU  GUUC UGUUUAgg  aau a
a        acc           CG    G        ag   g 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques [1]. Expression was later confirmed by qRT-PCR [2]. This sequence is named MID246 in [2].

Genome context
chr6: 98024531-98024621 [+]

Disease association
hsa-mir-2113 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-2113

Accession MIMAT0009206
Description Homo sapiens hsa-miR-2113 mature miRNA
Sequence 56 - AUUUGUGCUUGGCUCUGUCAC - 76
Evidence experimental
qRT-PCR [2]

References

  1. PubMed ID: 19015728
    MicroRNA expression patterns and function in endodermal differentiation of human embryonic stem cells
    Tzur G, Levy A, Meiri E, Barad O, Spector Y, Bentwich Z, Mizrahi L, Katzenellenbogen M, Ben-Shushan E, Reubinoff BE, Galun E
    PLoS One (2008) 3:e3726

  2. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298