miRBase entry: mmu-mir-764

Stem-loop mmu-mir-764


Accession
MI0004310
Symbol
MGI: Mir764
Description
Mus musculus mmu-mir-764 precursor miRNA
Gene family
MIPF0000707; mir-764

Literature search
1 open access papers mention mmu-mir-764
(2 sentences)

Sequence

410 reads, 32 reads per million, 17 experiments
ucaacacaaucugaaucuuggaggcaGGUGCUCACAUGUCCUCCUccaugcuuauaaauacauggAGGAGGCCAUAGUGGCAACUGUcaccaugauugauuucguugg
.((((..((((..((((.(((.(((((.(((.((((((.(((((((((((..........))))))))))).))).)))))).))))).))).))))))))..)))).

Structure
u    ac    ug    u   a     G   U   -   U           cuua 
 caac  aauc  aauc ugg ggcaG UGC CAC AUG CCUCCUccaug    u
 ||||  ||||  |||| ||| ||||| ||| ||| ||| |||||||||||     
 guug  uuag  uuag acc cUGUC ACG GUG UAC GGAGGAgguac    a
g    cu    --    u   a     A   -   A   C           auaa 


Annotation confidence High
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Genome context
chrX: 147002259-147002366 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from mmu-mir-764
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-764-5p

Accession MIMAT0003894
Description Mus musculus mmu-miR-764-5p mature miRNA
Sequence 27 - GGUGCUCACAUGUCCUCCU - 45
Evidence experimental
PCR [1], RAKE [1], Illumina [2]
Database links
Predicted targets

Mature mmu-miR-764-3p

Accession MIMAT0003895
Description Mus musculus mmu-miR-764-3p mature miRNA
Sequence 66 - AGGAGGCCAUAGUGGCAACUGU - 87
Evidence experimental
PCR [1], RAKE [1], Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298