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miRBase |
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Stem-loop sequence mmu-mir-344d-1 |
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Accession | MI0004524 (change log) | |||||
Symbol | MGI:Mir344d-1 | |||||
Description | Mus musculus miR-344d-1 stem-loop | |||||
Gene family | MIPF0000267; mir-344 | |||||
Literature search |
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10 open access papers mention mmu-mir-344d-1 | |||||
Stem-loop |
--a a u c c ca u 5' ucaguc ggc g ugg uaua ccaggacu a |||||| ||| | ||| |||| |||||||| u 3' agucag ccg c acc auau gguccugg c gaa a u - a -a u |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This sequence was identified as a miRNA candidate by Berezikov et al [1], and confirmed later by sequencing [2]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mmu-miR-344d-1-5p |
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Accession | MIMAT0014819 |
Previous IDs | mmu-miR-344d-1* |
Sequence |
4 - agucaggcugcuggcuauacacca - 27 |
Deep sequencing | 19 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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Mature sequence mmu-miR-344d-3p |
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Accession | MIMAT0014808 |
Previous IDs | mmu-miR-344d |
Sequence |
45 - gauauaaccacugccagacuga - 66 |
Deep sequencing | 33184 reads, 47 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:16954537
"Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis"
Genome Res. 16:1289-1298(2006).
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2 |
PMID:20413612
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"
Genes Dev. 24:992-1009(2010).
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