miRBase entry: bta-mir-320a-2

Stem-loop bta-mir-320a-2


Accession
MI0004748
Description
Bos taurus bta-mir-320a-2 precursor miRNA
Gene family
MIPF0000163; mir-320

Literature search
15 open access papers mention bta-mir-320a-2
(71 sentences)

Sequence

84635 reads, 926 reads per million, 78 experiments
aaaaacgaaaaagaggccuucucuucccgguucuucccggagucgggAAAAGCUGGGUUGAGAGGGCGAaaaaggaagaggg
...............((((((((..(((((((.((((((....)))))).)))))))..))))))))...............

Structure
aaaaacgaaaaagag        uu       c      g 
               gccuucuc  cccgguu uucccg a
               ||||||||  ||||||| ||||||  
               CGGGAGAG  GGGUCGA AAgggc g
gggagaaggaaaaAG        UU       A      u 


Annotation confidence Not enough data
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Genome context
chr20: 15289880-15289961 [+]

Database links

Mature bta-miR-320a

Accession MIMAT0003534
Description Bos taurus bta-miR-320a mature miRNA
Sequence 48 - AAAAGCUGGGUUGAGAGGGCGA - 69
Evidence experimental
cloned [2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 19267191
    Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
    "Long JE, Chen HX"
    "Biochem Genet (2009) 47:329-343