miRBase entry: dre-mir-190b

Stem-loop dre-mir-190b


Accession
MI0004764
Description
Danio rerio dre-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190

Literature search
5 open access papers mention dre-mir-190b
(9 sentences)

Sequence

326 reads, 47 reads per million, 7 experiments
uguuacagacuaugUGAUAUGUUUGAUAUUCGGUUGcuuucuuuauaucaugucaacuaaauaucagacauauuccuauagacugugaca
((((((((.(((((.(((((((((((((((.((((((..............).))))).)))))))))))))))..))))).))))))))

Structure
        a     -U               C     - uuucuu 
uguuacag cuaug  GAUAUGUUUGAUAUU GGUUG c      u
|||||||| |||||  ||||||||||||||| ||||| |       
acaguguc gauau  uuauacagacuauaa ucaac g      a
        a     cc               a     u uacuau 


Annotation confidence Not enough data
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Genome context
chr16: 17705898-17705987 [-]

Database links

Mature dre-miR-190b

Accession MIMAT0003747
Description Danio rerio dre-miR-190b mature miRNA
Sequence 15 - UGAUAUGUUUGAUAUUCGGUUG - 36
Evidence experimental
cloned [1], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569