Stem-loop dre-mir-722-1

Accession

MI0004765

Description

Danio rerio dre-mir-722-1 precursor miRNA mir-722

Gene
family

RF03697; mir-722

Literature search

4 open access papers mention dre-mir-722-1
(78 sentences)

Sequence

435340 reads, 492.0 reads per million, 239 experiments

ggaacggaguggaaUUUGAAACGUUUUGGCCAAAAAUguagccauggcaaagggguUUUUUGCAGAAACGUUUCAGAUuucgcuccguucu
(((((((((((((((((((((((((((.((.((((((.(.((....))....).)))))).)).)))))))))))))))))))))))))))

Structure

                           G  C      g ---a  c 
ggaacggaguggaaUUUGAAACGUUUU GC AAAAAU u    gc a
||||||||||||||||||||||||||| || |||||| |    ||  
ucuugccucgcuuUAGACUUUGCAAAG CG UUUUug g    cg u
                           A  U      g gaaa  g 

Annotation confidence High

Genome context

chr1: 56363884-56363974 [-]

Mature dre-miR-722-5p

• Accession: MIMAT0052788
• Description: Danio rerio dre-miR-722-5p mature miRNA
• Sequence: 15 - UUUGAAACGUUUUGGCCAAAAAU - 37
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-722-3p

• Accession: MIMAT0003748
• Description: Danio rerio dre-miR-722-3p mature miRNA
• Sequence: 57 - UUUUUGCAGAAACGUUUCAGAU - 78
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569