Stem-loop sequence dre-mir-723

Accession

MI0004767 (change log)

Description

Danio rerio miR-723 stem-loop

Gene family

MIPF0001831; mir-723

Stem-loop

   u  --          ag    u     a       acu       a 
5'  gc  guagagauaa  acag uuuaa ugauguu   uuuuuuc a
    ||  ||||||||||  |||| ||||| |||||||   |||||||  
3'  cg  caucucuauu  uguc aaauu acuacag   aaagagg a
   a  aa          cg    u     a       ---       u 

Deep sequencing

11 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCz11; GCA_000002035.4): KN149706.1: 28026-28114 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:mir723
• EntrezGene:mir723
• miRBase Tracker:MI0004767

Mature sequence dre-miR-723-5p

• Accession: MIMAT0003750
• Previous IDs: dre-miR-723*
• Sequence: 15 - gacaguuuuaaaugauguuacuuu - 38
• Evidence: experimental; cloned [1], Northern [1]

Mature sequence dre-miR-723-3p

• Accession: MIMAT0003751
• Previous IDs: dre-miR-723
• Sequence: 53 - aagacaucaauuaaaucugugcu - 75
• Deep sequencing: 11 reads, 3 experiments
• Evidence: experimental; cloned [1], Northern [1]
• Predicted targets:
  • TargetScanFish:dre-miR-723

References

1. PMID:16698962 "Cloning and expression of new microRNAs from zebrafish" Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH Nucleic Acids Res. 34:2558-2569(2006).