Stem-loop sequence dre-mir-726

Accession

MI0004770 (change log)

Description

Danio rerio miR-726 stem-loop

Gene family

MIPF0001344; mir-726

Literature search

2 open access papers mention dre-mir-726
(6 sentences)

Stem-loop

        c     c    aa   c      uc      a  c  g 
5' ucagu guaug cugg  uuc gcuagu  ugaacu uu gu a
   ||||| ||||| ||||  ||| ||||||  |||||| || || u
3' aguca cauau ggcu  aag cgauca  acuuga aa cg u
        a     a    -c   a      uc      a  -  g 

Deep sequencing

114 reads, 0 reads per million, 11 experiments

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (GRCz11; GCA_000002035.4)	Overlapping transcripts
chr11: 25476099-25476185 [-]	intergenic
KZ115359.1: 101986-102072 [-]	intergenic

Database links

• EntrezGene:mir726
• EntrezGene:mir726
• RNAcentral:URS000075A01C_7955
• miRBase Tracker:MI0004770

Mature sequence dre-miR-726

• Accession: MIMAT0003754
• Sequence: 55 - uucacuacuagcagaacucgg - 75
• Deep sequencing: 100 reads, 9 experiments
• Evidence: experimental; cloned [1], Northern [1]
• Database links:
  • RNAcentral:URS000075B75D_7955
• Predicted targets:
  • TargetScanFish:dre-miR-726

References

1. PMID:16698962 "Cloning and expression of new microRNAs from zebrafish" Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH Nucleic Acids Res. 34:2558-2569(2006).