miRBase entry: xtr-mir-1a-2

Stem-loop xtr-mir-1a-2


Accession
MI0004788
Description
Xenopus tropicalis xtr-mir-1a-2 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

ugggagacauacuucuuuauauguccauauggaagugccaaugcuaUGGAAUGUAAAGAAGUAUGUAucuc
.((((.((((((((((((((((.(((((((((.....)))....)))))))))))))))))))))).))))

Structure
u    g                g      ----   a 
 ggga acauacuucuuuauau uccaua    ugg a
 |||| |||||||||||||||| ||||||    ||| g
 cucu UGUAUGAAGAAAUGUA AGGUau    acc u
-    A                -      cgua   g 


Annotation confidence Not enough data
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Genome context
KV460667.1: 104668-104738 [-]

Database links

Mature xtr-miR-1a

Accession MIMAT0003551
Description Xenopus tropicalis xtr-miR-1a mature miRNA
Sequence 47 - UGGAAUGUAAAGAAGUAUGUA - 67
Evidence experimental
Northern [1]

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112