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miRBase |
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Stem-loop sequence bmo-mir-279a |
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Accession | MI0004982 (change log) | ||||
Previous IDs | bmo-mir-279 | ||||
Description | Bombyx mori miR-279a stem-loop | ||||
Gene family | MIPF0000184; mir-279 | ||||
Literature search |
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8 open access papers mention bmo-mir-279a | ||||
Stem-loop |
a u uuc ga g uuua 5' cg caauuucu gaugagug gguuuagu caug u || |||||||| |||||||| |||||||| |||| u 3' gc guugaagg cuacucac cuagauca guac u a - uac ac - caca |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bmo-miR-279a |
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Accession | MIMAT0004204 |
Previous IDs | bmo-miR-279 |
Sequence |
52 - ugacuagauccacacucau - 70 |
Deep sequencing | 88735 reads, 3 experiments |
Evidence | experimental; Northern [2], RT-PCR [3], Illumina [4] |
Database links |
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References |
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1 |
PMID:16972323
"Computational prediction of microRNA genes in silkworm genome"
J Zhejiang Univ Sci B. 7:806-816(2006).
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2 |
PMID:18507836
"Identification and characteristics of microRNAs from Bombyx mori"
BMC Genomics. 9:248(2008).
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3 |
PMID:18977439
"Identification of conserved microRNAs in Bombyx mori (silkworm) and regulation of fibroin L chain production by microRNAs in heterologous system"
Insect Biochem Mol Biol. 38:1066-1071(2008).
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4 |
PMID:20199675
"MicroRNAs of Bombyx mori identified by Solexa sequencing"
BMC Genomics. 11:148(2010).
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