Stem-loop mtr-MIR395g

Accession

MI0005074

Description

Medicago truncatula mtr-MIR395g precursor miRNA

Literature search

5 open access papers mention mtr-MIR395g
(12 sentences)

Sequence

3451 reads, 26.0 reads per million, 110 experiments

gAGUUCCUCUGAACGCUUCAUAUAagagguuauccaucuucaUUGAAGUGUUUGGGGGAACUC
((((((((((((((((((((...((((((....)).))))...))))))))))))))))))))

Structure

                    UAU    -  u 
gAGUUCCUCUGAACGCUUCA   Aaga gg u
||||||||||||||||||||   |||| ||  
CUCAAGGGGGUUUGUGAAGU   uucu cc a
                    Uac    a  u 

Annotation confidence High

Genome context

chr5: 16636838-16636900 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR395g

Mature mtr-miR395g-5p

• Accession: MIMAT0054752
• Description: Medicago truncatula mtr-miR395g-5p mature miRNA
• Sequence: 2 - AGUUCCUCUGAACGCUUCAUAUA - 24
• Evidence: experimental ; unknown

Mature mtr-miR395g-3p

• Accession: MIMAT0003860
• Description: Medicago truncatula mtr-miR395g-3p mature miRNA
• Sequence: 43 - UUGAAGUGUUUGGGGGAACUC - 63
• Evidence: not_experimental

References

1. PubMed ID: 16117853
   Molecular evolution of the rice miR395 gene family
   "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
   "Cell Res (2005) 15:631-638