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miRBase |
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Stem-loop sequence osa-MIR395m |
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Accession | MI0005084 (change log) | |||||||||||||||||
Description | Oryza sativa miR395m stem-loop | |||||||||||||||||
Gene family | MIPF0000016; MIR395 | |||||||||||||||||
Literature search |
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39 open access papers mention osa-MIR395m | |||||||||||||||||
Stem-loop |
u u g --g --a u a cu a 5' gaguucucc caaa cacuuca ua auagcuagcu ggcuucau gc uuaca guu c ||||||||| |||| ||||||| || |||||||||| |||||||| || ||||| ||| 3' cucaagggg guuu gugaagu au uguugaucga ccggggua cg agugu caa a - - g aua aaa - - -- a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the gene names have been rationalised to reflect this arrangement [1]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence osa-miR395m |
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Accession | MIMAT0003870 |
Sequence |
100 - gugaaguguuugggggaacuc - 120 |
Deep sequencing | 25 reads, 2 experiments |
Evidence | by similarity; MI0001007 |
Database links |
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References |
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1 |
PMID:16117853
"Molecular evolution of the rice miR395 gene family"
Cell Res. 15:631-638(2005).
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