Stem-loop osa-MIR395p

Accession

MI0005087

Description

Oryza sativa osa-MIR395p precursor miRNA

Literature search

40 open access papers mention osa-MIR395p
(167 sentences)

Sequence

29 reads, 20 reads per million, 2 experiments

gaguucccuucaagcacuucacguggcacuauuucaaugcguaccguGUGAAGUGUUUGGGGGAACUC
(((((((((.((((((((((((((((.(((((....))).)).)))))))))))))))))))))))))

Structure

         u                c  -   u 
gaguucccu caagcacuucacgugg ac uau u
||||||||| |||||||||||||||| || |||  
CUCAAGGGG GUUUGUGAAGUGugcc ug gua c
         -                a  c   a 

Annotation confidence Low

Comments

Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the gene names have been rationalised to reflect this arrangement [1].

Genome context

Chr4: 32622525-32622592 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from osa-MIR395p

Mature osa-miR395p

• Accession: MIMAT0003873
• Description: Oryza sativa osa-miR395p mature miRNA
• Sequence: 48 - GUGAAGUGUUUGGGGGAACUC - 68
• Evidence: not_experimental

References

1. PubMed ID: 16117853
   Molecular evolution of the rice miR395 gene family
   "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
   "Cell Res (2005) 15:631-638