miRBase entry: ath-MIR773a

Stem-loop ath-MIR773a


Accession
MI0005103
Description
Arabidopsis thaliana ath-MIR773a precursor miRNA
Gene family
MIPF0001106; MIR773

Literature search
5 open access papers mention ath-MIR773a
(11 sentences)

Sequence

aggaggcaauagcuugagcaaauaauugauugcagaaguccaucgacuaaagcugucaccugUUUGCUUCCAGCUUUUGUCUCcu
(((((((((.((((.(((((((((..((((.((...((((....))))...)).))))..)))))))))..)))).)))))))))

Structure
         u    -u         au    u  aga    c 
aggaggcaa agcu  gagcaaaua  ugau gc   aguc a
||||||||| ||||  |||||||||  |||| ||   ||||  
ucCUCUGUU UCGA  UUCGUUUgu  acug cg   ucag u
         U    CC         cc    u  aaa    c 


Annotation confidence Not enough data
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Genome context
chr1: 13067251-13067335 [+]

Database links

Mature ath-miR773a

Accession MIMAT0003932
Description Arabidopsis thaliana ath-miR773a mature miRNA
Sequence 63 - UUUGCUUCCAGCUUUUGUCUC - 83
Evidence experimental
MPSS [1], Northern [1], 454 [2], cloned [2]

References

  1. PubMed ID: 16954541
    MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant
    "Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC"
    "Genome Res (2006) 16:1276-1288

  2. PubMed ID: 17299599
    High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes
    Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC
    PLoS One (2007) 2:e219