Stem-loop sequence ptc-MIR403c

AccessionMI0005115 (change log)
DescriptionPopulus trichocarpa miR403c stem-loop
Gene family MIPF0000290; MIR403
Literature search

1 open access papers mention ptc-MIR403c
(1 sentences)

Stem-loop 
   --                         cacaacc   cac 
5'   gguuugugcguggaucugaggccau       guc   u
     |||||||||||||||||||||||||       |||    
3'   ucaaacacgcacuuagauuucggua       cag   a
   gc                         -acccac   cac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000344.2: 6485433-6485511 [+]
intergenic
Database links

Mature sequence ptc-miR403c-5p

Accession MIMAT0022932
Sequence

3 -  

uuugugcguggaucugaggcc

 - 23

Get sequence
Evidence experimental; miRNAseq [1]

Mature sequence ptc-miR403c-3p

Accession MIMAT0003944
Previous IDsptc-miR403c
Sequence

59 -  

uuagauucacgcacaaacucg

 - 79

Get sequence
Evidence experimental; miRNAseq [1]

References

1
PMID:22442676 "Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets" Puzey JR, Karger A, Axtell M, Kramer EM PLoS One. 7:e33034(2012).