miRBase entry: mdo-mir-186

Stem-loop mdo-mir-186


Accession
MI0005311
Description
Monodelphis domestica mdo-mir-186 precursor miRNA
Gene family
MIPF0000109; mir-186


Sequence

16889 reads, 371 reads per million, 5 experiments
accuucCAAAGAAUUCUCCUUUUGGGCUUuugauucuuaauuucagCCCAAAGGUGAAUUUUUUGGGa
...(((((((((((((.(((((.(((((...((((...))))..)))))))))).)))))))))))))

Structure
acc             U     U     Uuu    c 
   uucCAAAGAAUUC CCUUU GGGCU   gauu  
   ||||||||||||| ||||| |||||   |||| u
   aGGGUUUUUUAAG GGAAA CCCga   uuaa  
---             U     -     -cu    u 


Annotation confidence High
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Genome context
chr2: 20448567-20448634 [+]

Database links

Mature mdo-miR-186-5p

Accession MIMAT0004122
Description Monodelphis domestica mdo-miR-186-5p mature miRNA
Sequence 7 - CAAAGAAUUCUCCUUUUGGGCUU - 29
Evidence experimental
Illumina [2]

Mature mdo-miR-186-3p

Accession MIMAT0026676
Description Monodelphis domestica mdo-miR-186-3p mature miRNA
Sequence 47 - CCCAAAGGUGAAUUUUUUGGG - 67
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45