miRBase entry: bta-let-7a-2

Stem-loop bta-let-7a-2


Accession
MI0005451
Description
Bos taurus bta-let-7a-2 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
63 open access papers mention bta-let-7a-2
(288 sentences)

Sequence

2452913 reads, 11827 reads per million, 77 experiments
agguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaucaagggagauaacuguacagccuccuagcuuuccu
(((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).))).)))

Structure
   uU   G   U             uagaauuac   aa 
agg  GAG UAG AGGUUGUAUAGUU         auc  g
|||  ||| ||| |||||||||||||         |||   
ucc  uuc auc uccgacaugucaa         uag  g
   -u   g   c             ---------   ag 


Annotation confidence Not enough data
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Genome context
chr15: 33533448-33533519 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-let-7a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-let-7a-5p

Accession MIMAT0003844
Description Bos taurus bta-let-7a-5p mature miRNA
Sequence 5 - UGAGGUAGUAGGUUGUAUAGUU - 26
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988