miRBase entry: bta-mir-125b-2

Stem-loop bta-mir-125b-2


Accession
MI0005457
Description
Bos taurus bta-mir-125b-2 precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
35 open access papers mention bta-mir-125b-2
(119 sentences)

Sequence

111778 reads, 1232 reads per million, 77 experiments
gacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguauuuuaguagcaucacaagucaggcucuugggaccuaggcggagggga
..((((.(((((((((.((((.(((.(((((((((.(((....))).).)))))))).))).)))))))).))))).))))....

Structure
--ga    u     -    U    C   A        - g   u 
    cuuu ccuag UCCC GAGA CCU ACUUGUGA g uau u
    |||| ||||| |||| |||| ||| |||||||| | |||  
    gagg ggauc aggg uucu gga ugaacacu c aug u
aggg    c     c    -    c   c        a g   a 


Annotation confidence High
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Genome context
chr1: 19935732-19935816 [-]

Database links

Mature bta-miR-125b

Accession MIMAT0003539
Description Bos taurus bta-miR-125b mature miRNA
Sequence 13 - UCCCUGAGACCCUAACUUGUGA - 34
Evidence experimental
cloned [1-2]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988

  2. PubMed ID: 19267191
    Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
    "Long JE, Chen HX"
    "Biochem Genet (2009) 47:329-343