miRBase entry: bta-mir-99b

Stem-loop bta-mir-99b


Accession
MI0005469
Description
Bos taurus bta-mir-99b precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
21 open access papers mention bta-mir-99b
(44 sentences)

Sequence

91528 reads, 1181 reads per million, 77 experiments
ggcaccCACCCGUAGAACCGACCUUGCGgggccuucgccgcacacaagcucgugucuguggguccguguc
(((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))

Structure
     cC         AC   C    --C g   c 
ggcac  ACCCGUAGA  CGA CUUG   G ggc u
|||||  |||||||||  ||| ||||   | |||  
cugug  ugggugucu  gcu gaac   c ccg u
     cc         gu   c    aca g   c 


Annotation confidence High
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Genome context
chr18: 58266580-58266649 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-99b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-99b

Accession MIMAT0004345
Description Bos taurus bta-miR-99b mature miRNA
Sequence 7 - CACCCGUAGAACCGACCUUGCG - 28
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988